################################### # AEVOL PARAMETERS # ################################### ##### 1. Initial setup ############ CHROMOSOME_INITIAL_LENGTH 5000 SEED 8974783643 GRID_SIZE 10 100 ##### 2. Selection ################ SELECTION_SCOPE global SELECTION_SCHEME fitness_proportionate 1000 SELFING_CONTROL ON 0 STATS_POP ON 100 STATS_BEST ON 10 RECOMB_ON_ALIGN ON ALIGN_FUNCTION SIGMOID 50 2 ALIGN_MATCH_BONUS 1 ALIGN_MISMATCH_COST -2 DOSAGE_EFFECT relative ##### 3. Mutation rates ########### POINT_MUTATION_RATE 1e-6 SMALL_INSERTION_RATE 1e-6 SMALL_DELETION_RATE 1e-6 MAX_INDEL_SIZE 6 ##### 4. Rearrangement rates (w/o alignements) DUPLICATION_RATE 1e-6 DELETION_RATE 1e-6 TRANSLOCATION_RATE 0 INVERSION_RATE 1e-6 ##### 5. Population Structure ##### ##### 6. Target function ########## ENV_ADD_GAUSSIAN 1.2 0.52 0.12 ENV_ADD_GAUSSIAN -1.4 0.5 0.07 ENV_ADD_GAUSSIAN 0.3 0.8 0.03 MAX_TRIANGLE_WIDTH 0.01 ##### 7. Recording ################ CHECKPOINT_STEP 1000 RECORD_TREE OFF